RunTimePredictor

class astropy.utils.timer.RunTimePredictor(func, *args, **kwargs)

Bases: object

Class to predict run time.

Note

Only predict for single varying numeric input parameter.

Parameters:

func : function

Function to time.

args : tuple

Fixed positional argument(s) for the function.

kwargs : dict

Fixed keyword argument(s) for the function.

Examples

>>> from astropy.utils.timer import RunTimePredictor

Set up a predictor for :

>>> p = RunTimePredictor(pow, 10)

Give it baseline data to use for prediction and get the function output values:

>>> p.time_func(range(10, 1000, 200))
>>> for input, result in sorted(p.results.items()):
...     print("pow(10, {0})\n{1}".format(input, result))
pow(10, 10)
10000000000
pow(10, 210)
10000000000...
pow(10, 410)
10000000000...
pow(10, 610)
10000000000...
pow(10, 810)
10000000000...

Fit a straight line assuming relationship (coefficients are returned):

>>> p.do_fit()  
array([1.16777420e-05,  1.00135803e-08])

Predict run time for :

>>> p.predict_time(5000)  
6.174564361572262e-05

Plot the prediction:

>>> p.plot(xlabeltext='Power of 10')  

When the changing argument is not the last, e.g., , something like this might work:

>>> p = RunTimePredictor(lambda x: pow(x, 2))
>>> p.time_func([2, 3, 5])
>>> sorted(p.results.items())
[(2, 4), (3, 9), (5, 25)]

Attributes Summary

results

Function outputs from time_func.

Methods Summary

do_fit([model, fitter, power, min_datapoints])	Fit a function to the lists of arguments and their respective run time in the cache.
plot([xscale, yscale, xlabeltext, save_as])	Plot prediction.
predict_time(arg)	Predict run time for given argument.
time_func(arglist)	Time the partial function for a list of single args and store run time in a cache.

Attributes Documentation

results

Function outputs from time_func.

A dictionary mapping input arguments (fixed arguments are not included) to their respective output values.

Methods Documentation

do_fit(model=None, fitter=None, power=1, min_datapoints=3)

Fit a function to the lists of arguments and their respective run time in the cache.

By default, this does a linear least-square fitting to a straight line on run time w.r.t. argument values raised to the given power, and returns the optimal intercept and slope.

Parameters:

model : astropy.modeling.Model

Model for the expected trend of run time (Y-axis) w.r.t. (X-axis). If None, will use Polynomial1D with degree=1.

fitter : astropy.modeling.fitting.Fitter

Fitter for the given model to extract optimal coefficient values. If None, will use LinearLSQFitter.

power : int, optional

Power of values to fit.

min_datapoints : int, optional

Minimum number of data points required for fitting. They can be built up with time_func.

Returns:

a : array_like

Fitted FittableModel parameters.

Raises:

AssertionError

Insufficient data points for fitting.

ModelsError

Invalid model or fitter.

plot(xscale=u'linear', yscale=u'linear', xlabeltext=u'args', save_as=u'')

Plot prediction.

Note

Uses matplotlib.

Parameters:

xscale, yscale : {‘linear’, ‘log’, ‘symlog’}

Scaling for matplotlib.axes.Axes.

xlabeltext : str, optional

Text for X-label.

save_as : str, optional

Save plot as given filename.

Raises:

AssertionError

Insufficient data for plotting.

predict_time(arg)

Predict run time for given argument. If prediction is already cached, cached value is returned.

Parameters:

arg : number

Input argument to predict run time for.

Returns:

t_est : float

Estimated run time for given argument.

Raises:

AssertionError

No fitted data for prediction.

time_func(arglist)

Time the partial function for a list of single args and store run time in a cache. This forms a baseline for the prediction.

This also stores function outputs in results.

Parameters:

arglist : list of numbers

List of input arguments to time.